BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027F08SP1|AL428763
(886 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig569 1703 0.0
>3x_Contig569
Length = 3008
Score = 1703 bits (856), Expect = 0.0
Identities = 877/886 (98%), Gaps = 1/886 (0%)
Strand = Plus / Plus
Query: 1 gatcactgaattagttccaagaggtatctacaataaaggtagtatatgcttcatttcttc 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gatcactgaattagtaccaagaggtatctacaataaaggtagtatatgcttcatttcttc 618
Query: 61 agttttacaactgttgattcattgtcggagttttgtaaaccttttaaatgtgattcatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 agttttacaactgttgattcattgtcggagttttgtaaaccttttaaatgtgattcatac 678
Query: 121 caccaccgtcagtcgaacaaattcagtttcaccactactaaatgcttgtatggatgtatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 caccaccgtcagtcgaacaaattcagtttcaccactactaaatgcttgtatggatgtatt 738
Query: 181 caaacgttttgatagagagacaatcgttaatgaactaaatgaaacaagggaaaattcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 caaacgttttgatagagagacaatcgttaatgaactaaatgaaacaagggaaaattcaaa 798
Query: 241 gacaaagtcgaaatcttcaaacttgaatgaaaacatcatttcgatagacccagaaccttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 gacaaagtcgaaatcttcaaacttgaatgaaaacatcatttcgatagacccagaaccttt 858
Query: 301 ctataagtcaatttcaaccctcccaaagtttaaagatttaacatggggacgtcaagaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 ctataagtcaatttcaaccctcccaaagtttaaagatttaacatggggacgtcaagaaga 918
Query: 361 tgctgaagagttcttaacccatatgttggaccaacttcatgaggagttcatcggaagtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 tgctgaagagttcttaacccatatgttggaccaacttcatgaggagttcatcggaagtat 978
Query: 421 caatactctaaatagcaacgacatcttgaatattttccaaagtttgcaggaagatgacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 caatactctaaatagcaacgacatcttgaatattttccaaagtttgcaggaagatgacca 1038
Query: 481 gaaggtgttcttcttaaagtatatytcamagtacaaaagcgcttctttcgctgagaaacc 540
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 1039 gaaggtgttcttcttaaagtatatttcaaagtacaaaagcgcttctttcgctgagaaacc 1098
Query: 541 tgaacaatcattgaaggcactatttgagaaatataagcmaactaatgatttaagctgatg 600
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 1099 tgaacaatcattgaaggcactatttgagaaatataagcaaactaatgatttaag-tgatg 1157
Query: 601 aagaagataaagagtggaaggaagtaagtcagacaggaaaammatccaagaatgcatcga 660
||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||
Sbjct: 1158 aagaagataaagagtggaaggaagtaagtaagaaaggaaaaaaatccaagaatgcatcga 1217
Query: 661 agcgaatcaccgaggtggaatcaagtccgatttcaacaattttcggtggacaattccgct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1218 agcgaatcaccgaggtggaatcaagtccgatttcaacaattttcggtggacaattccgct 1277
Query: 721 ctgtactcgatacacctcaaaacaaagagtctcaatcaattacttatgatccgtttcaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1278 ctgtactcgatacacctcaaaacaaagagtctcaatcaattacttatgatccgtttcaaa 1337
Query: 781 ctatccagctagatatttctagcccagatgttattgacttagaatctgctttcaagaagt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1338 ctatccagctagatatttctagcccagatgttattgacttagaatctgctttcaagaagt 1397
Query: 841 ttagcgaacaagaatcaattgaattgaagagctcatctggcaatga 886
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1398 ttagcgaacaagaatcaattgaattgaagagctcatctggcaatga 1443
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7915
Number of Sequences: 1807
Number of extensions: 7915
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 886
length of database: 10,358,551
effective HSP length: 16
effective length of query: 870
effective length of database: 10,329,639
effective search space: 8986785930
effective search space used: 8986785930
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)